VOGDB release 228

Release date
Release ID
228
Data source
NCBI Refseq release 228
Number of genomes
14972
Number of proteins
685635
VOGDB group
Number of VFAM: 39548 (Virus protein families)
Number of VFOLD: 33008 (Virus protein structural folds)
Number of VOG: 48295 (Virus orthologous groups)
Base URL
VOGDB release 228
VOGDB File
vfam.annotations.tsv.gz (Funcational annotations of groups): 284,708 bytes, MD5 checksum 6a120f33ad1ff56122565ca522787da3 https://fileshare.csb.univie.ac.at/vog/vog228/vfam.annotations.tsv.gz
vfam.faa.tar.gz (Protein sequences of groups): 62,553,613 bytes, MD5 checksum 64643a081cd583abf2ed2076f9cc89fb https://fileshare.csb.univie.ac.at/vog/vog228/vfam.faa.tar.gz
vfam.hmm.tar.gz (Hidden Markov Models of groups): 458,288,674 bytes, MD5 checksum f8f7b4779b6b0c926b518f23b94c20f5 https://fileshare.csb.univie.ac.at/vog/vog228/vfam.hmm.tar.gz
vfam.lca.tsv.gz (Last common aencestors of groups): 433,832 bytes, MD5 checksum 2bf0f29fa5abb6516a0a42ae4b357ca4 https://fileshare.csb.univie.ac.at/vog/vog228/vfam.lca.tsv.gz
vfam.members.tsv.gz (Member protein ids of groups): 4,220,185 bytes, MD5 checksum 2ca99d07a3e16cdd313768d0c651a112 https://fileshare.csb.univie.ac.at/vog/vog228/vfam.members.tsv.gz
vfam.raw_algs.alistat.txt (Statistics of multiple alignments): 3,014,537 bytes, MD5 checksum 623f49426b6dfacedbc75306ac95ee5f https://fileshare.csb.univie.ac.at/vog/vog228/vfam.raw_algs.alistat.txt
vfam.raw_algs.tar.gz (Multiple sequence alignments of groups): 60,436,461 bytes, MD5 checksum 7ba8c3a1797fdcad7d29f18dda5ce846 https://fileshare.csb.univie.ac.at/vog/vog228/vfam.raw_algs.tar.gz
vfam.representatives.colabfold_mean_plddt.txt (Mean pLDDT values of protein structure predictions): 54,656 bytes, MD5 checksum 909812d588e1055c7836af833ff6c320 https://fileshare.csb.univie.ac.at/vog/vog228/vfam.representatives.colabfold_mean_plddt.txt
vfam.representatives.colabfold_predictions.tar.gz (Protein structure predictions): 2,973,834,642 bytes, MD5 checksum 09fc5fb6f36ac27b7d7ad87317988707 https://fileshare.csb.univie.ac.at/vog/vog228/vfam.representatives.colabfold_predictions.tar.gz
vfam.virusonly.tsv.gz (Specificity if groups to Viruses): 104,124 bytes, MD5 checksum 3ead4811cf25519c14c2c968f57ceacd https://fileshare.csb.univie.ac.at/vog/vog228/vfam.virusonly.tsv.gz
vfold.annotations.tsv.gz (Funcational annotations of groups): 238,196 bytes, MD5 checksum 04d13c9189e67d1166e5c01979812422 https://fileshare.csb.univie.ac.at/vog/vog228/vfold.annotations.tsv.gz
vfold.faa.tar.gz (Protein sequences of groups): 61,393,882 bytes, MD5 checksum c38bfbf76c8d1fe1f90c36c83a667db1 https://fileshare.csb.univie.ac.at/vog/vog228/vfold.faa.tar.gz
vfold.lca.tsv.gz (Last common aencestors of groups): 360,725 bytes, MD5 checksum f6de34446ac0ef52166518e0b1eaf462 https://fileshare.csb.univie.ac.at/vog/vog228/vfold.lca.tsv.gz
vfold.members.tsv.gz (Member protein ids of groups): 4,202,953 bytes, MD5 checksum 2675dc4564c29f7bd3cb37884d3b5a3d https://fileshare.csb.univie.ac.at/vog/vog228/vfold.members.tsv.gz
vfold.virusonly.tsv.gz (Specificity if groups to Viruses): 80,886 bytes, MD5 checksum 4da583345cab8c1eae88656818da6195 https://fileshare.csb.univie.ac.at/vog/vog228/vfold.virusonly.tsv.gz
vog.annotations.tsv.gz (Funcational annotations of groups): 364,905 bytes, MD5 checksum d52d25d9c2e0132b4258aa70ced801ed https://fileshare.csb.univie.ac.at/vog/vog228/vog.annotations.tsv.gz
vogdb.functional_categories.txt (Lettercodes of functional categories): 264 bytes, MD5 checksum 91da9fb2ea00ce7ffb3248a072847a62 https://fileshare.csb.univie.ac.at/vog/vog228/vogdb.functional_categories.txt
vogdb.genes.all.fa.gz (Gene sequences of all genomes): 164,416,118 bytes, MD5 checksum 8a5b0788873683b1f57d3922f41a4ec6 https://fileshare.csb.univie.ac.at/vog/vog228/vogdb.genes.all.fa.gz
vogdb.host.txt (Host information and classification for genomes): 524,877 bytes, MD5 checksum bd3b5301acffc2a3ef65411f99a6f424 https://fileshare.csb.univie.ac.at/vog/vog228/vogdb.host.txt
vogdb.proteins.all.fa.gz (Protein sequences of all genomes): 102,089,886 bytes, MD5 checksum bfcf016b6b32e167cfb55bf1789626e7 https://fileshare.csb.univie.ac.at/vog/vog228/vogdb.proteins.all.fa.gz
vogdb.species.txt (Virus genomes used for VOG construction): 778,259 bytes, MD5 checksum 4df82d8fe96b262239fa2febc950e86b https://fileshare.csb.univie.ac.at/vog/vog228/vogdb.species.txt
vogdb.taxonomy.krona.html (Distribution of virus genome taxonomies): 5,848,508 bytes, MD5 checksum 9f4940013ad4e63519409d6e14910ae2 https://fileshare.csb.univie.ac.at/vog/vog228/vogdb.taxonomy.krona.html
vog.faa.tar.gz (Protein sequences of groups): 63,417,593 bytes, MD5 checksum 1f137b280a0a9f0596b52e8728ce2c92 https://fileshare.csb.univie.ac.at/vog/vog228/vog.faa.tar.gz
vog.hmm.tar.gz (Hidden Markov Models of groups): 562,284,185 bytes, MD5 checksum c3af9ad0af1ab9155d6d9e4b91fe65fb https://fileshare.csb.univie.ac.at/vog/vog228/vog.hmm.tar.gz
vog.lca.tsv.gz (Last common aencestors of groups): 553,158 bytes, MD5 checksum 2ac3dc72a81dd30cacf31ab5adfd33ca https://fileshare.csb.univie.ac.at/vog/vog228/vog.lca.tsv.gz
vog.members.tsv.gz (Member protein ids of groups): 4,368,348 bytes, MD5 checksum 8f25487f1d57076a0e7098cd064ec11a https://fileshare.csb.univie.ac.at/vog/vog228/vog.members.tsv.gz
vog.raw_algs.alistat.txt (Statistics of multiple alignments): 3,623,224 bytes, MD5 checksum f56bfafdf19028fad4a09bd12cd8a2c3 https://fileshare.csb.univie.ac.at/vog/vog228/vog.raw_algs.alistat.txt
vog.raw_algs.tar.gz (Multiple sequence alignments of groups): 59,428,851 bytes, MD5 checksum 73e3043651c769d181434a270a06cfb7 https://fileshare.csb.univie.ac.at/vog/vog228/vog.raw_algs.tar.gz
vog.virusonly.tsv.gz (Specificity if groups to Viruses): 125,948 bytes, MD5 checksum c2c78396fbbbbe2323381ea97ebbb19c https://fileshare.csb.univie.ac.at/vog/vog228/vog.virusonly.tsv.gz